Merge branch 'ps/refs-without-the-repository'

Merge branch 'ps/refs-without-the-repository'

The refs API lost functions that implicitly assumes to work on the
primary ref_store by forcing the callers to pass a ref_store as an
argument.

* ps/refs-without-the-repository:
  refs: remove functions without ref store
  cocci: apply rules to rewrite callers of "refs" interfaces
  cocci: introduce rules to transform "refs" to pass ref store
  refs: add `exclude_patterns` parameter to `for_each_fullref_in()`
  refs: introduce missing functions that accept a `struct ref_store`